Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799705.1_cds_XP_016466441.1_5875
CDS Infomation

[gene=LOC107789177] [db_xref=GeneID:107789177] [protein=armadillo repeat-containing protein 6] [protein_id=XP_016466441.1] [location=join(10746..10893,10980..11279,12138..12421,14714..14842,15731..15853,16210..16317,16925..17103,17438..17561)] [gbkey=CDS]
Sequence

ATGGCCCCACCGAACTCCGGTCGCACAATATCTCAACAAGCCTTCGATGAATTAGTGAAA
GAAAATATTGAAGATCTTGGAATGGACCCAACAGAAGCCCTTGAAGACGCCATTCAAACC
CTATCTCTCCAAGGCGTCGATCTCTCCGGTATTGTGACTAGCGTTTCGGGATCTGGGGAG
GAAAATCCGGTAATTCAATCACTTGAGAGGCTGAAGGAATTGGATCGTGATTGGAAGCAG
GGAGACGGGGATAAGAGCGACGTGAAGCAAATTATTGAATGGTTAGATAAGTTAAATGAT
GTGTGTAATGTTGATGGATCAGGAAATGCTGCTATAGCAACTAAGAATGGTGCTGTAGGA
TTGGTGTGTTCCATATGTTGTAAACTTGGGAGTGGATTCGATCAGGGCCTTGTTTCAGCT
CTGAAGACGTTGGCTTCTTTACTTCATGATCTACAGAGCACTGAAATGTTTAGAGAGAGT
AATGGTCCAAAGATGGTTATGAATATCCTAAACAATAGGAAAGAAAACATAAGCATCTTG
AACAGCGGATTGTCTGTTGTTTCTGCAGCTGCAACTGGTAATGCGGTCCTCAAGGAGGCA
TTTATGAACTTGAAAATTGATGAGCTGATTCTTCAATGTTTAAGAGAATATAGTAGGGGG
AGCATTCCTTATTTATATGACGCTTTACGAGTCTTGCTAACATCTGATGATAATCGTGTT
GTGGCCTCTGAAGTTTACGGGTACGCCAGAAGGTTTGCCAAAATTGGAATTGTCGAAGCG
CTTGTTGGTTCACTTCATGAAGGGATAAAGTCGCCTAGTCTAGTGTCTGCAAGCATCGCT
TTGAAGGCTGTTGCTGTTAATGATGAAATATGCAGAGCTGTTGCTGATAATGGTGGTATA
GATGCAACTCTTCGATGCATAGATGACAGCAGTGAACAGGGTGAAAAAGTTGTGGCCAGA
ACTTGTTGCTCCTTGTTATCTAAGTTGGCAGGAAGTGACATAAACAAGAGTGCTATTGTA
GAAAAGGGTGGCATGGACAAGCTTATTAAACTTGCAACAAGATTTTCTGATGATCCGTCT
ATGCTACAAGAGGTCATGTCTATGATTACCGTACTGTCCTTGAGGTCTCCAAATAATGCT
GCCCGTGCAGTTGAAGCTGGAGCTGGTGATACTGTTATCCAAGCTATGCAGAGGTTTCCA
GAATCAGAGCAACTGCTAAAAAGCTGTTGTTTCATGATTCGAAATCTTGTGGTTAGGAAT
CCAGAAAACAGAACTATTTTGCTTGGTAATGGCATTGAGAAGCTCATCAGAAAGGCCAAG
ATGAATCACAAGAGCTGTAAGAATGCTGCAACTGATGCACTTAGGGATCTTGGACAAGAT
AACTATAACTTGTAA

Peptide Sequence

PEP ID

XP_016466441.1
PEP Infomation

PREDICTED: armadillo repeat-containing protein 6 [Nicotiana tabacum]
Sequence

MAPPNSGRTISQQAFDELVKENIEDLGMDPTEALEDAIQTLSLQGVDLSGIVTSVSGSGE
ENPVIQSLERLKELDRDWKQGDGDKSDVKQIIEWLDKLNDVCNVDGSGNAAIATKNGAVG
LVCSICCKLGSGFDQGLVSALKTLASLLHDLQSTEMFRESNGPKMVMNILNNRKENISIL
NSGLSVVSAAATGNAVLKEAFMNLKIDELILQCLREYSRGSIPYLYDALRVLLTSDDNRV
VASEVYGYARRFAKIGIVEALVGSLHEGIKSPSLVSASIALKAVAVNDEICRAVADNGGI
DATLRCIDDSSEQGEKVVARTCCSLLSKLAGSDINKSAIVEKGGMDKLIKLATRFSDDPS
MLQEVMSMITVLSLRSPNNAARAVEAGAGDTVIQAMQRFPESEQLLKSCCFMIRNLVVRN
PENRTILLGNGIEKLIRKAKMNHKSCKNAATDALRDLGQDNYNL

Transcript Sequence

Gene sequence data has not been registered.